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Publications:  Dr John Murphy

Jones J, Murphy JF, Arnold A, Pretty J, Spencer K, Markus AA, Vethaak AD (2020). Analysis, Prevalence & Impact of Microplastics in Freshwater and Estuarine Environments Evidence Review 2 What are the sources of the microplastics found in freshwater environments?. Defra (London), report no. WT15112.ER2,
https://qmro.qmul.ac.uk/xmlui/handle/123456789/65404
Jones J, Murphy J, Arnold A, Pretty J, Spencer K, Markus AA, Vethaak AD (2020). Evidence Reviews on Analysis, Prevalence & Impact of Microplastics in Freshwater and Estuarine Environments Evidence Review 3 What is/are the impact(s) of microplastics on freshwater and estuarine biota?. Defra (London), report no. WT15112.ER3,
https://qmro.qmul.ac.uk/xmlui/handle/123456789/65403
Jones J, Murphy JF, Arnold A, Pretty J, Spencer K, Markus AA, Vethaak AD (2020). Evidence Reviews on Analysis, Prevalence & Impact of Microplastics in Freshwater and Estuarine Environments. Evidence Review 1 Are the current sampling and analytical methods scientifically robust and appropriate?. Defra (Defra, London), report no. WT15112.ER1,
https://qmro.qmul.ac.uk/xmlui/handle/123456789/65402
Makiola A, Compson ZG, Baird DJ, Barnes MA, Boerlijst SP, Bouchez A, Brennan G, Bush A et al.(2020). Key Questions for Next-Generation Biomonitoring. Frontiers in Environmental Science vol. 7,
10.3389/fenvs.2019.00197
https://qmro.qmul.ac.uk/xmlui/handle/123456789/62498
JONES JI, Spencer K, Rainbow PS, Collins AL, Murphy J, Arnold A, Duerdoth CP, Pretty JL et al. (2019). The Ecological Impacts of Contaminated Sediment from Abandoned Metal Mines. Department for Environment, Food and Rural Affairs (London, UK), report no. WT0970,
JONES JI, MURPHY JF, Collins AL, SPENCER KL, RAINBOW PS, ARNOLD A, PRETTY J, Moorhouse AML et al.(2019). The Impact of Metal-Rich Sediments Derived from Mining on Freshwater Stream Life. Reviews of Environmental Contamination and Toxicology vol. 247, 1-79.
10.1007/398_2018_21
https://qmro.qmul.ac.uk/xmlui/handle/123456789/55088
MURPHY JF, Jones JI, Arnold A, Duerdoth CP, Pretty JL, Naden PS, Sear DA, Collins AL(2017). Can macroinvertebrate biological traits indicate fine‐grained sediment conditions in streams?. River Research and Applications
10.1002/rra.3194
https://qmro.qmul.ac.uk/xmlui/handle/123456789/25709
Wilkes MA, McKenzie M, Murphy JF, Chadd RP(2017). Assessing the mechanistic basis for fine sediment biomonitoring: Inconsistencies among the literature, traits and indices. River Research and Applications
10.1002/rra.3139
https://qmro.qmul.ac.uk/xmlui/handle/123456789/19402
Jones JI, Douthwright TA, Arnold A, Duerdoth CP, MURPHY JF, Edwards FK, Pretty JL(2017). Diatoms As Indicators Of Fine Sediment Stress. Ecohydrology
10.1002/eco.1832
https://qmro.qmul.ac.uk/xmlui/handle/123456789/19282
Jones JI, Murphy JF, Anthony SG, Arnold A, Blackburn JH, Duerdoth CP, Hawczak A, Hughes GO et al.(2016). Do agri-environment schemes result in improved water quality?. Journal of Applied Ecology
10.1111/1365-2664.12780
https://qmro.qmul.ac.uk/xmlui/handle/123456789/22299
Growns I, Murphy JF, Jones JI(2016). The effects of altered flow and bed sediment on macroinvertebrates in stream mesocosms. Marine and Freshwater Research vol. 68, (3) 496-505.
10.1071/MF15160
https://qmro.qmul.ac.uk/xmlui/handle/123456789/22019
Naden PS, Murphy JF, Old GH, Newman J, Scarlett P, Harman M, Duerdoth CP, Hawczak A et al.(2016). Understanding the controls on deposited fine sediment in the streams of agricultural catchments. Science of the Total Environment vol. 547, 366-381.
10.1016/j.scitotenv.2015.12.079
https://qmro.qmul.ac.uk/xmlui/handle/123456789/22301
Murphy JF, Jones JI, Pretty JL, Duerdoth CP, Hawczak A, Arnold A, Blackburn JH, Naden PS et al.(2015). Development of a biotic index using stream macroinvertebrates to assess stress from deposited fine sediment. Freshwater Biology vol. 60, (10) 2019-2036.
10.1111/fwb.12627
https://qmro.qmul.ac.uk/xmlui/handle/123456789/9684
Murphy JF, Jones JI, Pretty JL, Duerdoth CP, Hawczak A, Arnold A, Blackburn JH, Naden PS et al.(2015). Development of a biotic index using stream macroinvertebrates to assess stress from deposited fine sediment. Freshwater Biology vol. 60, (10) 2019-2036.
10.1111/fwb.12627
Duerdoth CP, Arnold A, Murphy JF, Naden PS, Scarlett P, Collins AL, Sear DA, JONES JI(2014). Assessment of a rapid method for quantitative reach-scale estimates of deposited fine sediment in rivers. Geomorphology vol. 230, 37-50.
10.1016/j.geomorph.2014.11.003
https://qmro.qmul.ac.uk/xmlui/handle/123456789/9644
Murphy JF, Winterbottom JH, Orton S, Simpson GL, Shilland EM, Hildrew AG(2014). Evidence of recovery from acidification in the macroinvertebrate assemblages of UK fresh waters: A 20-year time series. Ecological Indicators vol. 37, (PART B) 330-340.
10.1016/j.ecolind.2012.07.009
MURPHY JF, Davy-Bowker J, McFarland B, Ormerod SJ(2013). A diagnostic biotic index for assessing acidity in sensitive streams in Britain. Ecological Indicators vol. 24, 562-572.
10.1016/j.ecolind.2012.08.014
Smart SM, Henrys PA, Purse BV, MURPHY JF, Bailey MJ, Marrs RH(2012). Clarity or Confusion? - Problems in attributing large-scale ecological changes to anthropogenic drivers. Ecological Indicators vol. 20, 51-66.
10.1016/j.ecolind.2012.01.022
MURPHY JF, Winterbottom JH, Orton S, Simpson GL, Shilland EM, Hildrew AG(2012). Evidence of recovery from acidification in the macroinvertebrate assemblages of UK fresh waters: A 20-year time series. Ecological Indicators
10.1016/j.ecolind.2012.07.009
MURPHY J, Nagorskaya LL, Smith JT(2011). Abundance and diversity of aquatic macroinvertebrate communities in lakes exposed to Chernobyl-derived ionising radiation. Journal of Environmental Radioactivity vol. 102, (7) 688-694.
10.1016/j.jenvrad.2011.04.007
Clarke RT, Davy-Bowker J, Dunbar M, Laize C, Scarlett P, MURPHY J (2011). Enhancement of the river invertebrate classification tool (RICT). SNIFFER report no. WFD119 Final Report,
Jones JI, Murphy JF, Collins AL, Sear DA, Naden PS, Armitage PD(2011). The impact of fine sediment on macro-invertebrates. River Research and Applications
10.1002/rra.1516
https://qmro.qmul.ac.uk/xmlui/handle/123456789/22548
Verdonschot PFM, Hering D, Murphy J, Jähnig SC, Rose NL, Graf W, Brabec K, Sandin L(2010). Climate Change and the Hydrology and Morphology of Freshwater Ecosystems. Climate Change Impacts on Freshwater Ecosystems,
Jones JI, Davy-Bowker J, MURPHY JF, Pretty JL(2010). Ecological monitoring and assessment of pollution in rivers. Ecology of Inductrial Pollution, Editors: Batty, LC, Hallberg, KB, Edition. 1st, Cambrdige University Press (Cambridge, UK),
Dunbar M, MURPHY JF, Clarke R, Baker R, Davies C, Scarlett P (2010). Countryside Survey: Headwater streams report from 2007. NERC (Swindon, UK), report no. CS Technical Report ,
Williams P, Biggs J, Crowe A, MURPHY JF, Nicolet P, Weatherby A, Dunbar M (2010). Countryside Survey: Ponds report from 2007. NERC (Swindon, UK), report no. CS Technical Report ,
Norton LR, MURPHY JF, Reynolds B, Marks S, Mackey EC (2009). Countryside Survey: Scotland results from 2007. NERC (Wallingford, UK),
Hering D, Schmidt-Kloiber A, MURPHY JF, Lücke S, Zamora-Munoz C, López-Rodríguez MJ, Huber T(2009). Potential impact of climate change on aquatic insects: A sensitivity analysis for European caddisflies (Trichoptera) based on distribution patterns and ecological preferences. Aquatic Sciences - Research Across Boundaries vol. 71, (1) 3-14.
10.1007/s00027-009-9159-5
Carey P, Wallis S, Chamberlain P, Cooper A, Emmett B, Maskell L, MURPHY JF, McCann T et al. (2008). Countryside Survey: UK results from 2007. NERC (Swindon, UK),
Graf W, MURPHY J, Dahl J, Zamora-Munoz C, López-Rodríguez MJ(2008). Distribution and ecological preferences of European freshwater organisms. Volume 1. Trichoptera. Pensoft (Sofia),
Davy-Bowker J, Davies C, MURPHY JF (2008). RAPID 2.1: A digital data entry system for River Habitat Surveys. Centre for Ecology and Hydrology (Wallingford, UK),
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Davy-Bowker J, Clarke RT, Johnson RK, Kokes J, Murphy JF, Zahradkova S(2006). A comparison of the European Water Framework Directive physical typology and RIVPACS-type models as alternative methods of establishing reference conditions for benthic macroinvertebrates. Hydrobiologia vol. 566, 91-105.
10.1007/s10750-006-0068-5
Clarke RT, Murphy JF(2006). Effects of locally rare taxa on the precision and sensitivity of RIVPACS bioassessment of freshwaters. Freshwater Biology vol. 51, (10) 1924-1940.
10.1111/j.1365-2427.2006.01611.x
Ormerod SJ, Lewis BR, Kowalik RA, Murphy JF, Davy-Bowker J(2006). Field testing the AWIC index for detecting acidification in British streams. Archiv Fur Hydrobiologie vol. 166, (1) 99-115.
10.1127/0003-9136/2006/0166-0099
Sand-Jensen K, Friberg N, MURPHY J(2006). Running Waters: historical development and restoration of lowland Danish streams. NERI (Copenhagen, Denmark),
MURPHY JF, Davy-Bowker J(2006). The predictive modelling approach to biomonitoring: taking river quality assessment forward. Biological Monitoring of Rivers: Applications and Perspectives, Editors: Ziglio, M, Siligardi, M, Flaim, G, Wiley (Chichester, UK),
Murphy JF, Davy-Bowker J(2005). Spatial structure in lotic macroinvertebrate communities in England and Wales: relationship with physical, chemical and anthropogenic stress variables. Hydrobiologia vol. 534, (1-3) 151-164.
10.1007/s10750-004-1451-8
Davy-Bowker J, Murphy JF, Rutt GR, Steel JEC, Furse MT(2005). The development and testing of a macroinvertebrate biotic index for detecting the impact of acidity on streams. Archiv Fur Hydrobiologie vol. 163, (3) 383-403.
10.1127/0003-9136/2005/0163-0383
Murphy JF, Giller PS, Horan MA(2002). Spatial scale and the aggregation of stream macroinvertebrates associated with leaf packs. Freshwater Biology vol. 39, (2) 325-337.
10.1046/j.1365-2427.1998.00284.x
Lehane BM, Giller PS, O'Halloran J, Smith C, Murphy J(2002). Experimental provision of large woody debris in streams as a trout management technique. Aquatic Conservation-Marine and Freshwater Ecosystems vol. 12, (3) 289-311.
10.1002/aqc.516
Murphy JF, Giller PS(2001). Detrital inputs to two low-order streams differing in riparian vegetation. International Association of Theoretical and Applied Limnology, Vol 27, Pt 3, Proceedings, Editors: Williams, WD, Edition. 27, E Schweizerbart'sche Verlagsbuchhandlung (Stuttgart),
Murphy JF, Giller PS(2001). Hazel leaf breakdown in two low-order streams differing in the functional efficiency of their detritivore assemblages. Archiv Fur Hydrobiologie vol. 150, (2) 249-267.
Smith C, Good M, Murphy JF, Giller PS, O'Halloran J(2000). Life-history patterns and spatial and temporal overlap in an assemblage of lotic Plecoptera in the Araglin Catchment Study Area, Ireland. Fundamental and Applied Limnology vol. 150, (1) 117-132.
10.1127/archiv-hydrobiol/150/2000/117
Murphy JF, Giller PS(2000). Seasonal dynamics of macroinvertebrate assemblages in the benthos and associated with detritus packs in two low-order streams with different riparian vegetation. Freshwater Biology vol. 43, (4) 617-631.
10.1046/j.1365-2427.2000.t01-1-00548.x
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