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Publications:  Dr Ann-Marie Baker

Demircioglu F, Wang J, Candido J, Costa ASH, Casado P, de Luxan Delgado B, Reynolds LE, Gomez-Escudero J et al.(2020). Cancer associated fibroblast FAK regulates malignant cell metabolism. Nature Communications vol. 11, (1) 1290-1290.
10.1038/s41467-020-15104-3
https://qmro.qmul.ac.uk/xmlui/handle/123456789/63362
Baker AM, Graham TA(2020). Concurrent in situ analysis of point mutations and immune infiltrate in FFPE cancers. Methods in Enzymology, vol. 636,
Baker AM, Graham TA(2020). In Situ Point Mutation Detection in FFPE Colorectal Cancers Using the BaseScope Assay. vol. 2148, 349-360.
10.1007/978-1-0716-0623-0_22
Baker AM, Cross W, Curtius K, Al Bakir I, Choi CHR, Davis HL, Temko D, Biswas S et al.(2019). Evolutionary history of human colitis-associated colorectal cancer. Gut vol. 68, (6) 985-995.
10.1136/gutjnl-2018-316191
https://qmro.qmul.ac.uk/xmlui/handle/123456789/43331
Baker AM, Gabbutt C, Williams MJ, Cereser B, Jawad N, Rodriguez-Justo M, Jansen M, Barnes CP et al.(2019). Crypt fusion as a homeostatic mechanism in the human colon. Gut vol. 68, (11) 1986-1993.
10.1136/gutjnl-2018-317540
https://qmro.qmul.ac.uk/xmlui/handle/123456789/56449
Cross W, Kovac M, Mustonen V, Temko D, Davis H, Baker A-M, Biswas S, Arnold R et al.(2018). The evolutionary landscape of colorectal tumorigenesis. Nat Ecol Evol vol. 2, (10) 1661-1672.
10.1038/s41559-018-0642-z
https://qmro.qmul.ac.uk/xmlui/handle/123456789/44792
Temko D, Van Gool IC, Rayner E, Glaire M, Makino S, Brown M, Chegwidden L, Palles C et al.(2018). Somatic POLE exonuclease domain mutations are early events in sporadic endometrial and colorectal carcinogenesis, determining driver mutational landscape, clonal neoantigen burden and immune response. J Pathol vol. 245, (3) 283-296.
10.1002/path.5081
https://qmro.qmul.ac.uk/xmlui/handle/123456789/59963
Fearon AE, Carter EP, Clayton NS, Wilkes EH, Baker AM, Kapitonova E, Bakhouche BA, Tanner Y et al.(2018). PHLDA1 Mediates Drug Resistance in Receptor Tyrosine Kinase-Driven Cancer. Cell Reports vol. 22, (9) 2469-2481.
10.1016/j.celrep.2018.02.028
https://qmro.qmul.ac.uk/xmlui/handle/123456789/56422
Baker A-M, Huang W, Wang X-MM, Jansen M, Ma X-J, Kim J, Anderson CM, Wu X et al.(2017). Robust RNA-based in situ mutation detection delineates colorectal cancer subclonal evolution. Nat Commun vol. 8, (1) 1998-1998.
10.1038/s41467-017-02295-5
https://qmro.qmul.ac.uk/xmlui/handle/123456789/31830
Sundaresan S, Meininger CA, Kang AJ, Photenhauer AL, Hayes MM, Sahoo N, Grembecka J, Cierpicki T et al.(2017). Gastrin Induces Nuclear Export and Proteasome Degradation of Menin in Enteric Glial Cells. Gastroenterology vol. 153, (6) 1555-1567.e15.
10.1053/j.gastro.2017.08.038
https://qmro.qmul.ac.uk/xmlui/handle/123456789/63499
Cioffi M, Trabulo SM, Vallespinos M, Raj D, Kheir TB, Lin ML, Begum J, Baker AM et al.(2017). The miR-25-93-106b cluster regulates tumor metastasis and immune evasion via modulation of CXCL12 and PD-L1. Oncotarget vol. 8, (13) 21609-21625.
10.18632/oncotarget.15450
https://qmro.qmul.ac.uk/xmlui/handle/123456789/59405
Martinez P, Timmer MR, Lau CT, Calpe S, Sancho-Serra MDC, Straub D, Baker A-M, Meijer SL et al.(2016). Dynamic clonal equilibrium and predetermined cancer risk in Barrett’s oesophagus. Nature Communications vol. 7, 12158-12158.
10.1038/ncomms12158
https://qmro.qmul.ac.uk/xmlui/handle/123456789/15334
Baker AM, Van Noorden S, Rodriguez-Justo M, Cohen P, Wright NA, Lampert IA(2016). Distribution of the c-MYC gene product in colorectal neoplasia. Histopathology vol. 69, (2) 222-229.
10.1111/his.12939
Baker AM, Graham TA(2016). Quantifying human intestinal stem cell and crypt dynamics: The implications for cancer screening and prevention. Expert Review of Gastroenterology and Hepatology vol. 10, (3) 277-279.
10.1586/17474124.2016.1134314
Gay L, Baker AM, Graham TA(2016). Tumour Cell Heterogeneity. F1000Research vol. 5,
10.12688/f1000research.7210.1
https://qmro.qmul.ac.uk/xmlui/handle/123456789/15126
Baker AM, Graham TA, Elia G, Wright NA, Rodriguez-Justo M(2015). Characterization of LGR5 stem cells in colorectal adenomas and carcinomas. Scientific Reports vol. 5,
10.1038/srep08654
https://qmro.qmul.ac.uk/xmlui/handle/123456789/24824
Baker AM, Graham TA(2014). Revealing human intestinal stem cell and crypt dynamics. Molecular and Cellular Oncology vol. 1, (3)
10.4161/23723548.2014.970069
Baker AM, Cereser B, Melton S, Fletcher AG, Rodriguez-Justo M, Tadrous PJ, Humphries A, Elia G et al.(2014). Quantification of crypt and stem cell evolution in the normal and neoplastic human colon. Cell Reports vol. 8, (4) 940-947.
10.1016/j.celrep.2014.07.019
Baker A-M, Bird D, Lang G, Cox TR, Erler JT(2013). Lysyl oxidase enzymatic function increases stiffness to drive colorectal cancer progression through FAK. Oncogene vol. 32, (14) 1863-1868.
10.1038/onc.2012.202
Cox TR, Bird D, Baker A-M, Barker HE, Ho MW-Y, Lang G, Erler JT(2013). LOX-mediated collagen crosslinking is responsible for fibrosis-enhanced metastasis. Cancer Res vol. 73, (6) 1721-1732.
10.1158/0008-5472.CAN-12-2233
Baker AM, Graham TA, Wright NA(2013). Pre-tumour clones, periodic selection and clonal interference in the origin and progression of gastrointestinal cancer: Potential for biomarker development. Journal of Pathology vol. 229, (4) 502-514.
10.1002/path.4157
Baker A-M, Bird D, Welti JC, Gourlaouen M, Lang G, Murray GI, Reynolds AR, Cox TR et al.(2013). Lysyl oxidase plays a critical role in endothelial cell stimulation to drive tumor angiogenesis. Cancer Res vol. 73, (2) 583-594.
10.1158/0008-5472.CAN-12-2447
Baker A-M, Cox TR, Bird D, Lang G, Murray GI, Sun X-F, Southall SM, Wilson JR et al.(2011). The role of lysyl oxidase in SRC-dependent proliferation and metastasis of colorectal cancer. J Natl Cancer Inst vol. 103, (5) 407-424.
10.1093/jnci/djq569
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