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Research

Publications: Dr Michael Barnes

Isaacs JD, Brockbank S, Pedersen AW, Hilkens C, Anderson A, Stocks P, Lendrem D, Tarn J et al. ( 2022 ) . RA-MAP, molecular immunological landscapes in early rheumatoid arthritis and healthy vaccine recipients . Scientific Data vol. 9 , ( 1 )
Abdulkareem M, Kenawy AA, Rauseo E, Lee AM, Sojoudi A, Amir-Khalili A, Lekadir K, Young AA et al. ( 2022 ) . Predicting post-contrast information from contrast agent free cardiac MRI using machine learning: Challenges and methods . Frontiers in Cardiovascular Medicine vol. 9 ,
Hunt GP, Grassi L, Henkin R, Smeraldi F, Spargo TP, Kabiljo R, Koks S, Ibrahim Z et al. ( 2022 ) . GEOexplorer: a webserver for gene expression analysis and visualisation . Nucleic Acids Research vol. 50 , ( W1 ) W367 - W374 .
Solanky S, Ejarque RA, Khan S, Tosi I, Dawe H, Dand N, Mahil S, Barnes MR et al. ( 2022 ) . IL-23-induced STAT3 translocation in MAIT cells at baseline is a candidate biomarker of response for biologics targeting the IL-23/IL-17 axis . BRITISH JOURNAL OF DERMATOLOGY . vol. 186 , E231 - E231 .
Rivellese F, Surace AEA, Goldmann K, Sciacca E, Çubuk C, Giorli G, John CR, Nerviani A et al. ( 2022 ) . Rituximab versus tocilizumab in rheumatoid arthritis: synovial biopsy-based biomarker analysis of the phase 4 R4RA randomized trial . Nature Medicine vol. 28 , ( 6 ) 1256 - 1268 .
Tarn J, Lendrem D, Barnes M, Casement J, Ng WF ( 2022 ) . Comorbidities in the UK Primary Sjögren’s Syndrome Registry . Frontiers in Immunology vol. 13 ,
Solanky S, Ejarque RA, Tosi I, Dawe H, Dand N, Mahil S, Barnes MR, Griffiths CEM et al. ( 2022 ) . Interleukin-23-induced STAT3 translocation in circulating mucosal-associated invariant T cells is a potential biomarker of clinical response to ustekinumab in psoriasis . BRITISH JOURNAL OF DERMATOLOGY . vol. 186 , E45 - E45 .
Hardman-Smart JA, Ejarque RA, Solanky S, Tosi I, Grys K, Nichols E, Villanova F, Barnes MR et al. ( 2022 ) . Relative frequency of monocyte subsets at baseline in psoriasis is associated with clinical outcome to secukinumab therapy . BRITISH JOURNAL OF DERMATOLOGY . vol. 186 , E15 - E16 .
Andres-Ejarque R, Ale HB, Grys K, Tosi I, Solanky S, Ainali C, Catak Z, Sreeneebus H et al. ( 2021 ) . Author Correction: Enhanced NF-κB signaling in type-2 dendritic cells at baseline predicts non-response to adalimumab in psoriasis (Nature Communications, (2021), 12, 1, (4741), 10.1038/s41467-021-25066-9) . Nature Communications vol. 12 , ( 1 )
Andres-Ejarque R, Ale HB, Grys K, Tosi I, Solanky S, Ainali C, Catak Z, Sreeneebus H et al. ( 2021 ) . Enhanced NF-κB signaling in type-2 dendritic cells at baseline predicts non-response to adalimumab in psoriasis . Nature Communications vol. 12 , ( 1 )
Saengkaew T, Ruiz-Babot G, David A, Mancini A, Mariniello K, Cabrera CP, Barnes MR, Dunkel L et al. ( 2021 ) . Whole exome sequencing identifies deleterious rare variants in CCDC141 in familial self-limited delayed puberty . npj Genomic Medicine vol. 6 , ( 1 )
Smedley D, Smith KR, Martin A, Thomas EA, McDonagh EM, Cipriani V, Ellingford JM, Arno G et al. ( 2021 ) . 100,000 genomes pilot on rare-disease diagnosis in health care — Preliminary report . New England Journal of Medicine vol. 385 , ( 20 ) 1868 - 1880 .
Geifman N, Azadbakht N, Zeng J, Wilkinson T, Dand N, Buchan I, Stocken D, Di Meglio P et al. ( 2021 ) . Defining trajectories of response in patients with psoriasis treated with biologic therapies . British Journal of Dermatology vol. 185 , ( 4 ) 825 - 835 .
Yiu ZZN, Barker JNWN, Barnes MR, Di Meglio P, Emsley R, Reynolds NJ, Smith CH, Warren RB et al. ( 2021 ) . Meeting Report: Psoriasis Stratification to Optimize Relevant Therapy Showcase . Journal of Investigative Dermatology vol. 141 , ( 8 ) 1872 - 1878 .
Saengkaew T, Mancini A, Ruiz-Babot G, Cabrera CP, Barnes MR, Dunkel L, Guasti L, Howard S ( 2021 ) . Defects in the GnRH Neuronal Migration factor, CCDC141, Lead to Self-Limited Delayed Puberty . Journal of the Endocrine Society vol. 5 , ( Supplement_1 ) a665 - a666 .
Surendran P, Feofanova EV, Lahrouchi N, Ntalla I, Karthikeyan S, Cook J, Chen L, Mifsud B et al. ( 2021 ) . Publisher Correction: Discovery of rare variants associated with blood pressure regulation through meta-analysis of 1.3 million individuals (Nature Genetics, (2020), 52, 12, (1314-1332), 10.1038/s41588-020-00713-x) . Nature Genetics vol. 53 , ( 5 )
Shoop-Worrall SJW, Hyrich KL, Wedderburn LR, Thomson W, Geifman N, CAPS the CLUSTER Consortium ( 2021 ) . Patient-reported wellbeing and clinical disease measures over time captured by multivariate trajectories of disease activity in individuals with juvenile idiopathic arthritis in the UK: a multicentre prospective longitudinal study . Lancet Rheumatol vol. 3 , ( 2 ) e111 - e121 .
Barnes M, Brockbank S, Bruce IN, Ciurtin C, Cop AP, Ehrenstein MR, Emery P, Fisher BA et al. ( 2021 ) . Characterization of disease course and remission in early seropositive rheumatoid arthritis: results from the TACERA longitudinal cohort study . Therapeutic Advances in Musculoskeletal Disease vol. 13 ,
Surendran P, Feofanova EV, Lahrouchi N, Ntalla I, Karthikeyan S, Cook J, Chen L, Mifsud B et al. ( 2020 ) . Discovery of rare variants associated with blood pressure regulation through meta-analysis of 1.3 million individuals . Nature Genetics vol. 52 , ( 12 ) 1314 - 1332 .
Ntalla I, Weng LC, Cartwright JH, Hall AW, Sveinbjornsson G, Tucker NR, Choi SH, Chaffin MD et al. ( 2020 ) . Multi-ancestry GWAS of the electrocardiographic PR interval identifies 202 loci underlying cardiac conduction . Nature Communications vol. 11 , ( 1 )
Cabrera CP, Pazoki R, Giri A, Hellwege JN, Evangelou E, Ramirez J, Wain LV, Tzoulaki I et al. ( 2020 ) . Multi-trait genome-wide association analysis of blood pressure identifies 45 additional loci . EUROPEAN JOURNAL OF HUMAN GENETICS . vol. 28 , 105 - 105 .
Loeff FC, Tsakok T, Dijk L, Hart MH, Duckworth M, Baudry D, Russell A, Dand N et al. ( 2020 ) . Clinical Impact of Antibodies against Ustekinumab in Psoriasis: An Observational, Cross-Sectional, Multicenter Study . Journal of Investigative Dermatology vol. 140 , ( 11 ) 2129 - 2137 .
Cherlin S, Lewis MJ, Plant D, Nair N, Goldmann K, Tzanis E, Barnes MR, Mckeigue P et al. ( 2020 ) . Investigation of genetically regulated gene expression and response to treatment in rheumatoid arthritis highlights an association between IL18RAP expression and treatment response . Annals of the Rheumatic Diseases vol. 79 , ( 11 ) 1446 - 1452 .
Aarum J, Cabrera CP, Jones TA, Rajendran S, Adiutori R, Giovannoni G, Barnes MR, Malaspina A et al. ( 2020 ) . Enzymatic degradation of RNA causes widespread protein aggregation in cell and tissue lysates . EMBO Reports vol. 21 , ( 10 )
Aarum J, Cabrera CP, Jones TA, Rajendran S, Adiutori R, Giovannoni G, Barnes MR, Malaspina A et al. ( 2020 ) . Enzymatic degradation of RNA causes widespread protein aggregation in cell and tissue lysates . EMBO Reports vol. 21 , ( 10 ) Article ARTN e49585 ,
Mancini A, Howard SR, Marelli F, Cabrera CP, Barnes MR, Sternberg MJE, Leprovots M, Hadjidemetriou I et al. ( 2020 ) . LGR4 deficiency results in delayed puberty through impaired Wnt/β-catenin signaling . JCI Insight vol. 5 , ( 11 )
Nicholls HL, John CR, Watson DS, Munroe PB, Barnes MR, Cabrera CP ( 2020 ) . Reaching the End-Game for GWAS: Machine Learning Approaches for the Prioritization of Complex Disease Loci . Frontiers in Genetics vol. 11 ,
Hemingway H, Lyons R, Li Q, Buchan I, Ainsworth J, Pell J, Morris A ( 2020 ) . A national initiative in data science for health: an evaluation of the UK Farr Institute . Int J Popul Data Sci vol. 5 , ( 1 ) 1128 - 1128 .
Ricci B, Millner TO, Pomella N, Zhang X, Guglielmi L, Badodi S, Ceric D, Gemma C et al. ( 2020 ) . Polycomb-mediated repression of EphrinA5 promotes growth and invasion of glioblastoma . Oncogene . vol. 39 , 2523 - 2538 .
Pan S, Tsakok T, Dand N, Lonsdale DO, Loeff FC, Bloem K, de Vries A, Baudry D et al. ( 2020 ) . Using Real-World Data to Guide Ustekinumab Dosing Strategies for Psoriasis: A Prospective Pharmacokinetic-Pharmacodynamic Study . Clinical and Translational Science vol. 13 , ( 2 ) 400 - 409 .
John CR, Watson D, Barnes MR, Pitzalis C, Lewis MJ ( 2020 ) . Spectrum: Fast density-aware spectral clustering for single and multi-omic data . Bioinformatics vol. 36 , ( 4 ) 1159 - 1166 .
John CR, Watson D, Russ D, Goldmann K, Ehrenstein M, Pitzalis C, Lewis M, Barnes M ( 2020 ) . M3C: Monte Carlo reference-based consensus clustering . Scientific Reports vol. 10 , ( 1 )
Smit RAJ, Trompet S, Leong A, Goodarzi MO, Postmus I, Warren H, Theusch E, Barnes MR et al. ( 2019 ) . Statin-induced LDL cholesterol response and type 2 diabetes: a bidirectional two-sample Mendelian randomization study . Pharmacogenomics Journal
Mancini A, Howard SR, Cabrera CP, Barnes MR, David A, Wehkalampi K, Vassert G, Cariboni A et al. ( 2019 ) . Defects in LGR4 Wnt-[beta]-catenin signalling impair GnRH network development, leading to delayed puberty . Endocrine Abstracts
Tsakok T, Wilson N, Dand N, Loeff FC, Bloem K, Baudry D, Duckworth M, Pan S et al. ( 2019 ) . Association of Serum Ustekinumab Levels With Clinical Response in Psoriasis . JAMA Dermatol vol. 155 , ( 11 ) 1235 - 1243 .
Petersen S, Munroe P, Aung N, Fung K, Vargas J, Yang C, Cabrera CP, Warren H et al. ( 2019 ) . Genome-wide analysis of left ventricular image-derived phenotypes identifies fourteen loci associated with cardiac morphogenesis and heart failure development . Circulation
Caley M, Marsh S, Martins VL, Corbett-Jones T, Chen M, Di W, Sheer D, McGrath JA et al. ( 2019 ) . 298 Defective DNA Repair and Chromosomal Instability in RDEB . Journal of Investigative Dermatology . vol. 139 ,
Mancini A, Howard SR, Cabrera CP, Barnes MR, David A, Wehkalampi K, Vassart G, Cariboni A et al. ( 2019 ) . LGR 4-Wnt beta-catenin signalling directs GnRH network development, with defects leading to self-limited delayed puberty . HORMONE RESEARCH IN PAEDIATRICS . vol. 91 , 46 - 46 .
Lewis MJ, Barnes MR, Blighe K, Goldmann K, Rana S, Hackney JA, Ramamoorthi N, John CR et al. ( 2019 ) . Molecular Portraits of Early Rheumatoid Arthritis Identify Clinical and Treatment Response Phenotypes . Cell Reports vol. 28 , 2455 - 2470 .
Cabrera CP, Ng F, Nicholls HL, Gupta A, Barnes MR, Munroe PB, Caulfield MJ ( 2019 ) . Over 1000 genetic loci influencing blood pressure with multiple systems and tissues implicated . Human Molecular Genetics vol. 28 , ( R2 ) R151 - R161 .
Thomas AM, Cabrera CP, Finlay M, Lall K, Nobles M, Schilling RJ, Wood K, Mein CA et al. ( 2019 ) . Differentially expressed genes for atrial fibrillation identified by RNA sequencing from paired human left and right atrial appendages . Physiol Genomics vol. 51 , ( 8 ) 323 - 332 .
Ntalla I, Weng L-C, Cartwright J, Hall AW, Sveinbjornsson G, Tucker N, Choi SH, Chaffin M et al. ( 2019 ) . Multi-ancestry GWAS of the electrocardiographic PR interval identifies 210 loci underlying cardiac conduction .
Aung N, Vargas JD, Manichaikul AW, Yang C, Cabrera CP, Warren HR, Fung K, Tzanis E et al. ( 2019 ) . 199Genetic architecture of left ventricular phenotypes derived from 17,000 CMR studies in the UK Biobank population imaging cohort . European Heart Journal - Cardiovascular Imaging . vol. 20 ,
Aung N, Vargas JD, Manichaikul AW, Yang C, Cabrera CP, Warren HR, Fung K, Tzanis E et al. ( 2019 ) . Genetic architecture of left ventricular phenotypes derived from 17,000 CMR studies in the UK Biobank population imaging cohort . EUROPEAN HEART JOURNAL-CARDIOVASCULAR IMAGING . vol. 20 , 155 - 156 .
Dand N, Duckworth M, Baudry D, Russell A, Curtis CJ, Lee SH, Evans I, Mason KJ et al. ( 2019 ) . HLA-C*06:02 genotype is a predictive biomarker of biologic treatment response in psoriasis . Journal of Allergy and Clinical Immunology vol. 143 , ( 6 ) 2120 - 2130 .
Aung N, Vargas JD, Manichaikul AW, Yang CP, Cabrera CP, Warren HR, Fung K, Tzanis E et al. ( 2019 ) . Heritability and genotypic correlation of CMR-derived LV phenotypes in the UK Biobank population imaging study . EUROPEAN HEART JOURNAL-CARDIOVASCULAR IMAGING . vol. 20 , 377 - 378 .
Aung N, Vargas JD, Manichaikul AW, Yang CP, Cabrera CP, Warren HR, Fung K, Tzanis E et al. ( 2019 ) . P463Heritability and genotypic correlation of CMR-derived LV phenotypes in the UK Biobank population imaging study . European Heart Journal - Cardiovascular Imaging . vol. 20 ,
John C, Watson D, Barnes M, Pitzalis C, Lewis M ( 2019 ) . Spectrum: Fast density-aware spectral clustering for single and multi-omic data .
Mancini A, Howard SR, Cabrera CP, Barnes MR, David A, Wehkalampi K, Heger S, Lomniczi A et al. ( 2019 ) . EAP1 regulation of GnRH promoter activity is important for human pubertal timing . Human Molecular Genetics vol. 28 , ( 8 ) 1357 - 1368 .
Howard S, Cabrera C, Barnes M, Dunkel L ( 2019 ) . MON-LB048 Delayed or Absent? Use of Next Generation Sequencing Diagnostic Tools in a UK Puberty Cohort . Journal of the Endocrine Society vol. 3 , ( Suppl 1 ) mon - lb048 .
HUMBY F ( 2019 ) . Synovial cellular and molecular signatures stratify clinical response to csDMARD therapy and predict radiographic progression in early rheumatoid arthritis patients . Annals of the Rheumatic Diseases
Bodagh N, Archbold RA, Weerackody R, Hawking MKD, Barnes MR, Lee AM, Janjuha S, Gutteridge C et al. ( 2019 ) . Feasibility of real-time capture of routine clinical data in the electronic health record: a hospital-based, observational service-evaluation study . BMJ Open vol. 8 , ( 3 ) e019790 - e019790 .
Foulkes AC, Watson DS, Carr DF, Kenny JG, Slidel T, Parslew R, Pirmohamed M, PSORT Consortium et al. ( 2019 ) . A Framework for Multi-Omic Prediction of Treatment Response to Biologic Therapy for Psoriasis . J Invest Dermatol vol. 139 , ( 1 ) 100 - 107 .
Watson DS, Krutzinna J, Bruce IN, Griffiths CEM, McInnes IB, Barnes MR, Floridi L ( 2019 ) . Clinical applications of machine learning algorithms: Beyond the black box . BMJ (Online) vol. 364 ,
O’Toole SM, Watson DS, Novoselova TV, Romano LEL, King PJ, Bradshaw TY, Thompson CL, Knight MM et al. ( 2019 ) . Oncometabolite induced primary cilia loss in pheochromocytoma . Endocrine-Related Cancer vol. 26 , ( 1 ) 165 - 180 .
Cope AP, Barnes MR, Belson A, Binks M, Brockbank S, Bonachela-Capdevila F, Carini C, Fisher BA et al. ( 2018 ) . The RA-MAP Consortium: a working model for academia-industry collaboration . Nat Rev Rheumatol vol. 14 , ( 1 ) 53 - 60 .
Cherlin S, Plant D, Taylor JC, Colombo M, Spiliopoulou A, Tzanis E, Morgan AW, Barnes MR et al. ( 2018 ) . Prediction of treatment response in rheumatoid arthritis patients using genome-wide SNP data . Genetic Epidemiology vol. 42 , ( 8 ) 754 - 771 .
Evangelou E, Warren HR, Mosen-Ansorena D, Mifsud B, Pazoki R, Gao H, Ntritsos G, Dimou N et al. ( 2018 ) . Publisher Correction: Genetic analysis of over 1 million people identifies 535 new loci associated with blood pressure traits . Nat Genet vol. 50 , ( 12 ) 1755 - 1755 .
Cabrera CP, Manson J, Shepherd JM, Torrance HD, Watson D, Longhi MP, Hoti M, Patel MB et al. ( 2018 ) . Correction: Signatures of inflammation and impending multiple organ dysfunction in the hyperacute phase of trauma: A prospective cohort study . PLoS Med vol. 15 , ( 10 ) e1002694 - e1002694 .
Costa ARD, Qarin S, Bradshaw T, Watson D, Prasad R, Metherell LA, Barnes MR, Skarnes W et al. ( 2018 ) . Can novel stem cell models help unpick the pathogenesis of the Triple A syndrome? . Endocrine Abstracts
Howard SR, Cabrera CP, Barnes MR, Dunkel L ( 2018 ) . Delayed or Absent? - use of next generation sequencing diagnostic tools in a UK puberty cohort . Endocrine Abstracts
Evangelou E, Warren HR, Mosen-Ansorena D, Mifsud B, Pazoki R, Gao H, Ntritsos G, Dimou N et al. ( 2018 ) . Genetic analysis of over 1 million people identifies 535 new loci associated with blood pressure traits . Nature Genetics vol. 50 , ( 10 ) 1412 - 1425 .
Kapil V, Rathod KS, Khambata RS, Bahra M, Velmurugan S, Purba A, S. Watson D, Barnes MR et al. ( 2018 ) . Sex differences in the nitrate-nitrite-NO <sup>•</sup> pathway: Role of oral nitrate-reducing bacteria . Free Radical Biology and Medicine vol. 126 , 113 - 121 .
Da Costa AR, Qarin S, Bradshaw TY, Watson D, Prasad R, Barnes MR, Metherell LA, Chapple JP et al. ( 2018 ) . A Novel Stem Cell Model for the Triple a Syndrome . HORMONE RESEARCH IN PAEDIATRICS . Conference: 57th Annual Meeting of the European Society for Paediatric Endocrinology (ESPE) ( Athens, Greece ) from: 27/09/2018 to: 29/09/2018 , vol. 90 , 29 - 29 .
Howard SR, Oleari R, Poliandri A, Chantzara V, Fantin A, Ruiz-Babot G, Metherell LA, Cabrera CP et al. ( 2018 ) . HS6ST1 Insufficiency Causes Self-Limited Delayed Puberty in Contrast with Other GnRH Deficiency Genes . Journal of Clinical Endocrinology and Metabolism vol. 103 , ( 9 ) 3420 - 3429 .
Tragante V, Hemerich D, Alshabeeb M, Brænne I, Lempiäinen H, Patel RS, den Ruijter HM, Barnes MR et al. ( 2018 ) . Druggability of Coronary Artery Disease Risk Loci . Circ Genom Precis Med vol. 11 , ( 8 ) e001977 - e001977 .
Jones TF, Torrance HDT, Owen HC, Brohi K, Barnes MR, Knight JC, Hinds CJ, Ackland GL et al. ( 2018 ) . MicroRNA profiles are associated with lymphocyte count after a major traumatic injury: a potential role for immunometabolism? . British Journal of Anaesthesia vol. 121 , ( 2 ) e23 - e24 .
John C, Watson D, Russ D, Goldmann K, Ehrenstein M, Pitzalis C, Lewis M, Barnes M ( 2018 ) . M3C: Monte Carlo reference-based consensus clustering . Abstract: java.sql.Clob org.hibernate.engine.jdbc.WrappedClob java.io.Serializable ,
Taylor JC, Bongartz T, Massey J, Mifsud B, Spiliopoulou A, Scott IC, Wang J, Morgan M et al. ( 2018 ) . Genome-wide association study of response to methotrexate in early rheumatoid arthritis patients . Pharmacogenomics Journal vol. 18 , ( 4 ) 528 - 538 .
Lewis MJ, Barnes MR ( 2018 ) . RNA sequencing and machine learning as molecular scalpels . Nat Rev Rheumatol vol. 14 , ( 7 ) 388 - 390 .
Warren HR, Evangelou E, Mosen D, Mifsud B, Pazoki R, Gao H, Ntritsos G, Dimou N et al. ( 2018 ) . GENETIC ANALYSIS OF OVER ONE MILLION PEOPLE IDENTIFIES 535 NOVEL LOCI ASSOCIATED WITH BLOOD PRESSURE AND RISK OF CARDIOVASCULAR DISEASE . Journal of Hypertension . vol. 36 ,
Marsh S, Caley MP, Martins V, Chen M, McGrath J, Barnes M, O'Toole EA ( 2018 ) . 812 Type VII collagen and Nesprin 2, LINCing the basement membrane to altered cell cycle and increased DNA damage . Journal of Investigative Dermatology . vol. 138 ,
Foulkes AC, Watson DS, Barnes MR ( 2018 ) . Bioinformatics for dermatology: why we should learn about code . Br J Dermatol vol. 178 , ( 4 ) 984 - 984 .
Thorneloe RJ, Griffiths CEM, Emsley R, Ashcroft DM, Cordingley L, Barker J, Benham M, Burden D et al. ( 2018 ) . Intentional and Unintentional Medication Non-Adherence in Psoriasis: The Role of Patients’ Medication Beliefs and Habit Strength . Journal of Investigative Dermatology vol. 138 , ( 4 ) 785 - 794 .
Howard SR, Guasti L, Poliandri A, David A, Cabrera CP, Barnes MR, Wehkalampi K, O'Rahilly S et al. ( 2018 ) . Contributions of function-Altering variants in genes implicated in pubertal timing and body mass for self-limited delayed puberty . Journal of Clinical Endocrinology and Metabolism vol. 103 , ( 2 ) 649 - 659 .
Cope AP, Barnes MR, Belson A, Binks M, Brockbank S, Bonachela-Capdevila F, Carini C, Fisher BA et al. ( 2018 ) . Corrigendum: The RA-MAP Consortium: a working model for academia-industry collaboration . Nat Rev Rheumatol vol. 14 , ( 2 )
Mancini A, Howard SR, Cabrera CP, Barnes MR, Heger S, Guasti L, Ojeda S, Dunkel L ( 2018 ) . EAP1 Mutations Cause an Impaired Transcriptional Activity on GnRH Promoter That Leads to Self-Limited Delayed Puberty . HORMONE RESEARCH IN PAEDIATRICS . vol. 90 , 20 - 20 .
RA-MAP Consortium ( 2018 ) . Novel methodology to discern predictors of remission and patterns of disease activity over time using rheumatoid arthritis clinical trials data . RMD Open vol. 4 , ( 2 )
Howard S, Andre V, Guasti L, Cabrera C, Barnes M, Cariboni A, Dunkel L ( 2017 ) . Patients with self-limited delayed puberty harbour mutations in multiple genes controlling GnRH neuronal development . Endocrine Abstracts
Marsh S, Caley M, Martins V, Barnes MR, Chen M, O'Toole EA ( 2017 ) . Loss of keratinocyte type VII collagen induces increased DNA damage in vitro and in vivo . JOURNAL OF INVESTIGATIVE DERMATOLOGY . Conference: ESDR 2017 vol. 137 , S225 - S225 .
Kraja AT, Cook JP, Warren HR, Surendran P, Liu C, Evangelou E, Manning AK, Grarup N et al. ( 2017 ) . New Blood Pressure-Associated Loci Identified in Meta-Analyses of 475 000 Individuals . Circulation: Cardiovascular Genetics vol. 10 , ( 5 )
Warren HR, Evangelou E, Cabrera CP, Gao H, Ren M, Mifsud B, Ntalla I, Surendran P et al. ( 2017 ) . Corrigendum: Genome-wide association analysis identifies novel blood pressure loci and offers biological insights into cardiovascular risk . Nat Genet vol. 49 , ( 10 ) 1558 - 1558 .
Wain LV, Vaez A, Jansen R, Joehanes R, Van Der Most PJ, Erzurumluoglu AM, O'Reilly PF, Cabrera CP et al. ( 2017 ) . Novel Blood Pressure Locus and Gene Discovery Using Genome-Wide Association Study and Expression Data Sets from Blood and the Kidney . Hypertension vol. 70 , ( 3 ) e4 - e19 .
Foulkes AC, Watson DS, Griffiths CEM, Warren RB, Huber W, Barnes MR ( 2017 ) . Research Techniques Made Simple: Bioinformatics for Genome-Scale Biology . Journal of Investigative Dermatology vol. 137 , ( 9 ) e163 - e168 .
MARINO S, Dibenedetto S, Niklison-Chirou M, Cabrera C, Ellis M, Robson LG, Knopp P, Barnes M et al. ( 2017 ) . Enhanced energetic state and protection from oxidative stress in human myoblasts overexpressing BMI1 . Stem Cell Reports
CABRERA CP, MANSON J, SHEPHERD JM, TORRANCE HD, WATSON D, LONGHI MP, HOTI M, PATEL MB et al. ( 2017 ) . Signatures of Inflammation and Impending Multiple Organ Dysfunction in the Hyperacute Phase of Trauma . PLoS Medicine
Sordi R, Nandra KK, Chiazza F, Johnson FL, Cabrera CP, Torrance HD, Yamada N, Patel NSA et al. ( 2017 ) . Artesunate Protects Against the Organ Injury and Dysfunction Induced by Severe Hemorrhage and Resuscitation . Ann Surg vol. 265 , ( 2 ) 408 - 417 .
Cabrera CP, Manson J, Shepherd JM, Torrance HD, Watson D, Longhi MP, Hoti M, Patel MB et al. ( 2017 ) . Signatures of inflammation and impending multiple organ dysfunction in the hyperacute phase of trauma: A prospective cohort study . PLoS Medicine vol. 14 , ( 7 )
Bodagh N, Archbold A, Weerackody R, Barnes M, Robson J, Timmis A ( 2017 ) . 100 Powerform for real-time entry of routine cardiac outpatient data into the electronic health record: application for audit and research . Heart . vol. 103 ,
Warren HR, Evangelou E, Cabrera CP, Gao H, Ren M, Mifsud B, Ntalla I, Surendran P et al. ( 2017 ) . Genome-wide association analysis identifies novel blood pressure loci and offers biological insights into cardiovascular risk . Nat Genet vol. 49 , ( 3 ) 403 - 415 .
Shaked A, Chang BL, Barnes MR, Sayre P, Li YR, Asare S, DesMarais M, Holmes MV et al. ( 2017 ) . An ectopically expressed serum miRNA signature is prognostic, diagnostic, and biologically related to liver allograft rejection . Hepatology vol. 65 , ( 1 ) 269 - 280 .
Howard SR, Andre V, Guasti L, Cabrera CP, Barnes MR, Cariboni A, Dunkel L ( 2017 ) . DISCOVERY OF MUTATIONS IN MULTIPLE GENES CONTROLLING GNRH NEURONAL MIGRATION AND DEVELOPMENT IN PATIENTS WITH SELF-LIMITED DELAYED PUBERTY . HORMONE RESEARCH IN PAEDIATRICS . vol. 88 , 59 - 59 .
Gagliano SA, Pouget JG, Hardy J, Knight J, Barnes MR, Ryten M, Weale ME ( 2016 ) . Genomics implicates adaptive and innate immunity in Alzheimer's and Parkinson's diseases . Annals of Clinical and Translational Neurology vol. 3 , ( 12 ) 924 - 933 .
Gagliano SA, Pouget JG, Hardy J, Barnes MR, Knight J, Ryten M, Weale ME ( 2016 ) . Genetic Variability in Both the Adaptive and Innate Immune Systems Contribute to Alzheimer's and Parkinson's Disease Risk . GENETIC EPIDEMIOLOGY . vol. 40 , 637 - 637 .
Mancini A, Howard SR, Ruiz-Babot G, Cabrera CP, Barnes MR, Guasti L, Dunkel L ( 2016 ) . LGR4 and EAP1 mutations are implicated in the phenotype of self-limited delayed puberty . Endocrine Abstracts .
Hosking A, Koulouroudias M, Zemrak F, Moon JC, Rossi A, Lee A, Barnes MR, Boubertakh R et al. ( 2016 ) . Evaluation of splenic switch off in a tertiary imaging centre: validation and assessment of utility . European Heart Journal Cardiovascular Imaging
Smit RA, Postmus I, Trompet S, Barnes MR, Warren H, Arsenault BJ, Chasman DI, Cupples LA et al. ( 2016 ) . Rooted in risk: genetic predisposition for low-density lipoprotein cholesterol level associates with diminished low-density lipoprotein cholesterol response to statin treatment . Pharmacogenomics vol. 17 , ( 15 ) 1621 - 1628 .
MUNROE PB ( 2016 ) . The genetics of blood pressure regulation and its target organs from association studies in 342,415 individuals . Nature Genetics
Foulkes AC, Watson DS, Rattray NJ, Donaldson M, Goodacre R, Reynolds N, Griffiths CE, Warren RB et al. ( 2016 ) . 039 Systems biology approach to the analysis of pharmacogenomic data in psoriasis . Journal of Investigative Dermatology . vol. 136 ,
Postmus I, Warren HR, Trompet S, Arsenault BJ, Avery CL, Bis JC, Chasman DI, de Keyser CE et al. ( 2016 ) . Meta-analysis of genome-wide association studies of HDL cholesterol response to statins . Journal of Medical Genetics
Broad J, Maurel D, Kung VWS, Hicks GA, Schemann M, Barnes MR, Kenakin TP, Granier S et al. ( 2016 ) . Human native kappa opioid receptor functions not predicted by recombinant receptors: Implications for drug design . Scientific Reports vol. 6 ,
Jia Z, Liu Y, Guan N, Bo X, Luo Z, Barnes MR ( 2016 ) . Cogena, a novel tool for co-expressed gene-set enrichment analysis, applied to drug repositioning and drug mode of action discovery . BMC Genomics vol. 17 , ( 1 )
Narasimhan VM, Hunt KA, Mason D, Baker CL, Karczewski KJ, Barnes MR, Barnett AH, Bates C et al. ( 2016 ) . Health and population effects of rare gene knockouts in adult humans with related parents . Science vol. 352 , ( 6284 ) 474 - 477 .
HOWARD SR, Guasti L, Ruiz-Babot G, Mancini A, David A, Storr H, Metherell LA, Sternberg MJE et al. ( 2016 ) . IGSF10 mutations dysregulate gonadotropin‐releasing hormone neuronal migration resulting in delayed puberty . EMBO Molecular Medicine vol. 8 , ( 6 ) 626 - 42 .
Tragante V, Braenne I, Moore JH, Barnes MR, Erdmann J, Asselbergs FW ( 2016 ) . Evaluating CAD/MI loci as targets for prevention of myocardial infarction . EUROPEAN JOURNAL OF CLINICAL INVESTIGATION vol. 46 , 20 - 21 .
Reglerol N, Beall R, Cabrera C, Pickworthl C, Golding M, Whiteford J, Nightingale T, Imhof B et al. ( 2016 ) . JAM-C deficiency primes endothelial cells for a pro-inflammatory state . FASEB JOURNAL . vol. 30 ,
Rucker JJH, Tansey KE, Rivera M, Pinto D, Cohen-Woods S, Uher R, Aitchison KJ, Craddock N et al. ( 2016 ) . Phenotypic association analyses with copy number variation in recurrent depressive disorder . Biological Psychiatry vol. 79 , ( 4 ) 329 - 336 .
Howard S, Guasti L, Ruiz-Babot G, Mancini A, David A, Storr H, Metherell L, Sternberg M et al. ( 2016 ) . Role of IGSF10 mutations in self-limited delayed puberty . The Lancet . vol. 387 ,
Rodriguez S, Gaunt TR, Guo Y, Zheng J, Barnes MR, Tang W, Danish F, Johnson A et al. ( 2016 ) . Lipids, obesity and gallbladder disease in women: Insights from genetic studies using the cardiovascular gene-centric 50K SNP array . European Journal of Human Genetics vol. 24 , ( 1 ) 106 - 112 .
Griffiths CEM, Barnes MR, Burden AD, Nestle FO, Reynolds NJ, Smith CH, Warren RB, Barker JNWN ( 2015 ) . Establishing an academic-industrial stratified medicine consortium: Psoriasis stratification to optimize relevant therapy . Journal of Investigative Dermatology vol. 135 , ( 12 ) 2903 - 2907 .
Howard S, Poliandre A, Storr HL, Metherell LA, Cabrera C, Warren H, Barnes M, Wehkalampi K et al. ( 2015 ) . Mutations in HS6ST1 cause self-limited delayed puberty (DP) in addition to idiopathic hypogonadotropic hypogonadism (IHH) . Endocrine Abstracts
Howard S, Guasti L, Ruiz-Babot G, Mancini A, David A, Storr H, Metherell L, Cabrera C et al. ( 2015 ) . Mutations in IGSF10 cause self-limited delayed puberty . Endocrine Abstracts
Gagliano SA, Ravji R, Barnes MR, Weale ME, Knight J ( 2015 ) . A Methods Comparison: In silico prioritization of genetic risk variants using functional genomic information . GENETIC EPIDEMIOLOGY . vol. 39 , 549 - 550 .
Kokkinopoulos I, Ishida H, Saba R, Ruchaya P, Cabrera C, Struebig M, Barnes M, Terry A et al. ( 2015 ) . Single-cell expression profiling reveals a dynamic state of cardiac precursor cells in the early mouse embryo . PLoS ONE vol. 10 , ( 10 )
Howard S, Poliandri A, Storr H, Metherell L, Cabrera C, Barnes M, Warren H, Wehkalampi K et al. ( 2015 ) . Mutations in HS6ST1 are causal in self-limited delayed puberty as well as idiopathic hypogonadotropic hypogonadism . Endocrine Abstracts
Howard S, Guasti L, Ruiz-Babot G, Mancini A, David A, Storr H, Metherell L, Sternberg M et al. ( 2015 ) . Mutations in IGSF10 cause self-limited delayed puberty, via disturbance of GnRH neuronal migration . Endocrine Abstracts
Jia Z, Zhang X, Guan N, Bo X, Barnes MR, Luo Z ( 2015 ) . Gene ranking of RNA-seq data via discriminant non-negative matrix factorization . PLoS ONE vol. 10 , ( 9 )
Lanktree MB, Elbers CC, Li Y, Zhang G, Duan Q, Karczewski KJ, Guo Y, Tragante V et al. ( 2015 ) . Genetic meta-analysis of 15,901 African Americans identifies variation in EXOC3L1 is associated with HDL concentration . Journal of Lipid Research vol. 56 , ( 9 ) 1781 - 1786 .
Gagliano SA, Ravji R, Barnes MR, Weale ME, Knight J ( 2015 ) . Smoking gun or circumstantial evidence? Comparison of statistical learning methods using functional annotations for prioritizing risk variants . Scientific Reports vol. 5 ,
Peyrot WJ, Lee SH, Milaneschi Y, Abdellaoui A, Byrne EM, Esko T, De Geus EJC, Hemani G et al. ( 2015 ) . The association between lower educational attainment and depression owing to shared genetic effects? Results in ∼25 000 subjects . Molecular Psychiatry vol. 20 , ( 6 ) 735 - 743 .
Carlotti E, Floyd J, Murray-Brown W, Barnes M, Mehr R, Bombardieri M, Pitzalis C ( 2015 ) . FRI0008 Longitudinal Analysis of the IGH-VH Gene by High-Throughput Sequencing in Early Rheumatoid Arthritis Paired Biopsies and its Association with Response to Dmards . Annals of the Rheumatic Diseases . vol. 74 ,
Taylor PN, Porcu E, Chew S, Campbell PJ, Traglia M, Brown SJ, Mullin BH, Shihab HA et al. ( 2015 ) . Erratum: Whole-genome sequence-based analysis of thyroid function (Nature Communications (2015) 6(5681) 10.1038/ncomms6681) . Nature Communications vol. 6 ,
Cabrera CP, Ng FL, Warren HR, Barnes MR, Munroe PB, Caulfield MJ ( 2015 ) . Exploring hypertension genome-wide association studies findings and impact on pathophysiology, pathways, and pharmacogenetics . Wiley Interdisciplinary Reviews: Systems Biology and Medicine vol. 7 , ( 2 ) 73 - 90 .
Taylor PN, Porcu E, Chew S, Campbell PJ, Traglia M, Brown SJ, Mullin BH, Shihab HA et al. ( 2015 ) . Whole-genome sequence-based analysis of thyroid function . Nature Communications vol. 6 ,
Maier R, Moser G, Chen GB, Ripke S, Coryell WH, Potash JB, Scheftner WA, Shi J et al. ( 2015 ) . Joint analysis of psychiatric disorders increases accuracy of risk prediction for schizophrenia, bipolar disorder, and major depressive disorder . American Journal of Human Genetics vol. 96 , ( 2 ) 283 - 294 .
O'Dushlaine C, Rossin L, Lee PH, Duncan L, Parikshak NN, Newhouse S, Ripke S, Neale BM et al. ( 2015 ) . Psychiatric genome-wide association study analyses implicate neuronal, immune and histone pathways . NATURE NEUROSCIENCE vol. 18 , ( 2 ) 199 - 209 .
Owen HC, Torrance HDT, Barnes MR, Brohi K, Knight JC, Hinds CJ, O’Dwyer MJ ( 2015 ) . The role of micrornas in the development of hospital acquired infection in polytrauma patients . Intensive Care Medicine Experimental vol. 3 ,
Foulkes AC, Rattray NJW, Correa E, Trivedi DK, Al-Sharqi A, Parslew R, Barnes M, Goodacre R et al. ( 2014 ) . Modulation of metabolomic signature on biological treatment with etanercept in psoriasis . BRITISH JOURNAL OF DERMATOLOGY . vol. 171 , E169 - E169 .
Foulkes AC, Carr DF, Al-Sharqi A, Parslew R, Pirmohamed M, Reynolds NJ, Donaldson M, Barnes M et al. ( 2014 ) . Pharmacogenomic signatures of response to etanercept therapy for psoriasis . BRITISH JOURNAL OF DERMATOLOGY . vol. 171 , E114 - E115 .
Postmus I, Trompet S, Deshmukh HA, Barnes MR, Li X, Warren HR, Chasman DI, Zhou K et al. ( 2014 ) . Pharmacogenetic meta-analysis of genome-wide association studies of LDL cholesterol response to statins . Nat Commun vol. 5 ,
Ricci B, Ceric D, Barnes M, Marino S ( 2014 ) . A NOVEL POLYCOMB FEED FORWARD LOOP IN GLIOBLASTOMA MULTIFORME . NEURO-ONCOLOGY . vol. 16 ,
Marino S, Ceric D, Ricci B, Barnes M ( 2014 ) . O4.07A NOVEL POLYCOMB FEED FORWARD LOOP IN GLIOBLASTOMA MULTIFORME . Neuro-Oncology vol. 16 , ( suppl_2 ) ii8 - ii8 .
Trompet S, Postmus I, Deshmukh HA, Barnes MR, Psaty BM, Tardif JC, Hitman G, Krauss RM et al. ( 2014 ) . Pharmacogenetic GWAS meta-analysis of LDL cholesterol response to statins . EUROPEAN HEART JOURNAL . vol. 35 , 370 - 370 .
Marsh S, Martins V, Caley M, Barnes M, Donaldson M, O'toole E ( 2014 ) . RNA-Seqing the skin basement membrane . JOURNAL OF INVESTIGATIVE DERMATOLOGY . vol. 134 , S25 - S25 .
Marino S, Ricci B, Greco A, Acquati S ( 2014 ) . A novel polycomb feed forward loop in glioblastoma multiforme . Neuro Oncol vol. 16 Suppl 3 ,
Gagliano SA, Barnes MR, Weale ME, Knight J ( 2014 ) . A Bayesian method to incorporate hundreds of functional characteristics with association evidence to improve variant prioritization . PLoS ONE vol. 9 , ( 5 )
Yoneyama S, Guo Y, Lanktree MB, Barnes MR, Elbers CC, Karczewski KJ, Padmanabhan S, Bauer F et al. ( 2014 ) . Gene-centric meta-analyses for central adiposity traits in up to 57 412 individuals of European descent confirm known loci and reveal several novel associations . HUMAN MOLECULAR GENETICS vol. 23 , ( 9 ) 2498 - 2510 .
Marsh S, Martins V, Caley M, Barnes M, Donaldson M, O'Toole E ( 2014 ) . Global transcriptomic changes in primary keratinocytes with loss of basement membrane genes . BRITISH JOURNAL OF DERMATOLOGY . vol. 170 , E37 - E38 .
Tragante V, Barnes MR, Ganesh SK, Lanktree MB, Guo W, Franceschini N, Smith EN, Johnson T et al. ( 2014 ) . Gene-centric meta-analysis in 87,736 individuals of European ancestry identifies multiple blood-pressure-related loci . Am J Hum Genet vol. 94 , ( 3 ) 349 - 360 .
Howard S, Guasti L, Storr H, Metherell L, Cariboni A, Barnes M, Cabrera C, Wehkalampi K et al. ( 2014 ) . A novel gene affecting the timing of puberty . Endocrine Abstracts
Voros S, Maurovich-Horvat P, Marvasty IB, Bansal AT, Barnes MR, Vazquez G, Murray SS, Voros V et al. ( 2014 ) . Precision phenotyping, panomics, and system-level bioinformatics to delineate complex biologies of atherosclerosis: Rationale and design of the "Genetic Loci and the Burden of Atherosclerotic Lesions" study . Journal of Cardiovascular Computed Tomography vol. 8 , ( 6 ) 442 - 451 .
Sanseau P, Agarwal P, Barnes MR, Pastinen T, Richards JB, Cardon LR, Mooser V ( 2013 ) . Rational drug repositioning by medical genetics Reply . NATURE BIOTECHNOLOGY vol. 31 , ( 12 ) 1082 - 1082 .
Cross-Disorder Group of the Psychiatric Genomics Consortium, Lee SH, Ripke S, Neale BM, Faraone SV, Purcell SM, Perlis RH, Mowry BJ et al. ( 2013 ) . Genetic relationship between five psychiatric disorders estimated from genome-wide SNPs . Nat Genet vol. 45 , ( 9 ) 984 - 994 .
Best LG, Saxena R, Anderson CM, Barnes MR, Hakonarson H, Falcon G, Martin C, Castillo BA et al. ( 2013 ) . Two Variants of the C-Reactive Protein Gene Are Associated with Risk of Pre-Eclampsia in an American Indian Population . PLOS ONE vol. 8 , ( 8 ) Article ARTN e71231 ,
Munroe PB, Barnes MR, Caulfield MJ ( 2013 ) . Advances in blood pressure genomics . Circ Res vol. 112 , ( 10 ) 1365 - 1379 .
Sullivan PF, Daly MJ, Ripke S, Lewis CM, Lin D-Y, Wray NR, Neale B, Levinson DF et al. ( 2013 ) . A mega-analysis of genome-wide association studies for major depressive disorder . MOLECULAR PSYCHIATRY vol. 18 , ( 4 ) 497 - 511 .
Howard S, Barnes M, Storr H, Wehkalampi K, Metherell L, Dunkel L ( 2013 ) . Familial constitutional delay in growth and puberty is a condition with significant genetic heterogeneity and limited overlap with the timing of puberty in the general population . Endocrine Abstracts1 - 1 .
Rucker JJH, Breen G, Pinto D, Pedroso I, Lewis CM, Cohen-Woods S, Uher R, Schosser A et al. ( 2013 ) . Genome-wide association analysis of copy number variation in recurrent depressive disorder . MOLECULAR PSYCHIATRY vol. 18 , ( 2 ) 183 - 189 .
Pedroso I, Lourdusamy A, Rietschel M, Noethen MM, Cichon S, McGuffin P, Al-Chalabi A, Barnes MR et al. ( 2012 ) . Common Genetic Variants and Gene-Expression Changes Associated with Bipolar Disorder Are Over-Represented in Brain Signaling Pathway Genes . BIOLOGICAL PSYCHIATRY vol. 72 , ( 4 ) 311 - 317 .
Jugurnauth SK, Chen CK, Barnes MR, Li T, Lin SK, Liu HC ( 2012 ) . Erratum: A COMT gene haplotype associated with methamphetamine abuse (Pharmacogenetics and Genomics (2011) 21 (731-740)) . Pharmacogenetics and Genomics vol. 22 , ( 7 )
Sanseau P, Agarwal P, Barnes MR, Pastinen T, Richards JB, Cardon LR, Mooser V ( 2012 ) . Use of genome-wide association studies for drug repositioning . NATURE BIOTECHNOLOGY vol. 30 , ( 4 ) 317 - 320 .
Barnes MR ( 2012 ) . An Open Innovation Ecosystem for Drug Discovery . MEDCHEMCOMM vol. 3 , ( 1 ) MCW92 - MCW97 .
Barnes MR, Huxley-Jones J, Maycox PR, Lennon M, Thornber A, Kelly F, Bates S, Taylor A et al. ( 2011 ) . Transcription and Pathway Analysis of the Superior Temporal Cortex and Anterior Prefrontal Cortex in Schizophrenia . JOURNAL OF NEUROSCIENCE RESEARCH vol. 89 , ( 8 ) 1218 - 1227 .
Xu C-F, Reck BH, Goodman VL, Xue Z, Huang L, Barnes MR, Koshy B, Spraggs CF et al. ( 2011 ) . Association of the hemochromatosis gene with pazopanib-induced transaminase elevation in renal cell carcinoma . JOURNAL OF HEPATOLOGY vol. 54 , ( 6 ) 1237 - 1243 .
Knight J, Barnes MR, Breen G, Weale ME ( 2011 ) . Using functional annotation for the Empirical determination of Bayes factors for genome-wide association study analysis . PLoS ONE vol. 6 , ( 4 )
Dow DJ, Huxley-Jones J, Hall JM, Francks C, Maycox PR, Kew JNC, Gloger IS, Mehta NAL et al. ( 2011 ) . ADAMTSL3 as a candidate gene for schizophrenia: Gene sequencing and ultra-high density association analysis by imputation . SCHIZOPHRENIA RESEARCH vol. 127 , ( 1-3 ) 28 - 34 .
Jugurnauth SK, Chen CK, Barnes MR, Li T, Lin SK, Liu HC, Collier DA, Breen G ( 2011 ) . A COMT gene haplotype associated with methamphetamine abuse . Pharmacogenetics and Genomics vol. 21 , ( 11 ) 731 - 740 .
Barnes M ( 2010 ) . Letter to the editor. "Low-energy extracorporeal shock wave therapy as a treatment for medial tibial stress syndrome" . Am J Sports Med vol. 38 , ( 11 )
Lewis CM, Ng MY, Butler AW, Cohen-Woods S, Uher R, Pirlo K, Weale ME, Schosser A et al. ( 2010 ) . Genome-Wide Association Study of Major Recurrent Depression in the UK Population . AM J PSYCHIAT vol. 167 , ( 8 ) 949 - 957 .
Uher R, Perroud N, Ng MYM, Hauser J, Henigsberg N, Maier W, Mors O, Placentino A et al. ( 2010 ) . Genome-Wide Pharmacogenetics of Antidepressant Response in the GENDEP Project . AMERICAN JOURNAL OF PSYCHIATRY vol. 167 , ( 5 ) 555 - 564 .
Maycox PR, Kelly F, Taylor A, Bates S, Reid J, Logendra R, Barnes MR, Larminie C et al. ( 2010 ) . Analysis of gene expression in two large schizophrenia cohorts identifies multiple changes associated with nerve terminal function . Molecular Psychiatry vol. 15 , ( 4 ) 442 - 443 .
Barnes MR, Breen G ( 2010 ) . A short primer on the functional analysis of copy number variation for biomedical scientists . Methods Mol Biol vol. 628 , 119 - 135 .
Barnes MR ( 2010 ) . Exploring the landscape of the genome . Methods Mol Biol vol. 628 , 21 - 38 .
Barnes MR ( 2010 ) . Genetic variation analysis for biomedical researchers: a primer . Methods Mol Biol vol. 628 , 1 - 20 .
Barnes MR, Breen G ( 2010 ) . Preface: "Your genome is an email attachment" .
Maycox PR, Kelly F, Taylor A, Bates S, Reid J, Logendra R, Barnes MR, Larminie C et al. ( 2009 ) . Analysis of gene expression in two large schizophrenia cohorts identifies multiple changes associated with nerve terminal function . MOLECULAR PSYCHIATRY vol. 14 , ( 12 ) 1083 - 1094 .
Maycox PR, Kelly F, Taylor A, Bates S, Reid J, Logendra R, Barnes MR, Larminie C et al. ( 2009 ) . Erratum: Analysis of gene expression in two large schizophrenia cohorts identifies multiple changes associated with nerve terminal function (Molecular Psychiatry (2009) 14 (1083-1094) DOI: 10.1038/mp.2009.18) . Molecular Psychiatry vol. 14 , ( 12 )
Knight J, Barnes MR, Breen G, Weale ME ( 2009 ) . Functional annotation of GWAS hits . GENETIC EPIDEMIOLOGY . vol. 33 , 787 - 788 .
Barnes MR, Harland L, Foord SM, Hall MD, Dix I, Thomas S, Williams-Jones BI, Brouwer CR ( 2009 ) . Lowering industry firewalls: pre-competitive informatics initiatives in drug discovery . Nat Rev Drug Discov vol. 8 , ( 9 ) 701 - 708 .
Baranzini SE, Galwey NW, Wang J, Khankhanian P, Lindberg R, Pelletier D, Wu W, Uitdehaag BMJ et al. ( 2009 ) . Pathway and network-based analysis of genome-wide association studies in multiple sclerosis . HUMAN MOLECULAR GENETICS vol. 18 , ( 11 ) 2078 - 2090 .
Rujescu D, Ingason A, Cichon S, Pietilainen OPH, Barnes MR, Toulopoulou T, Picchioni M, Vassos E et al. ( 2009 ) . Disruption of the neurexin 1 gene is associated with schizophrenia . HUMAN MOLECULAR GENETICS vol. 18 , ( 5 ) 988 - 996 .
Huxley-Jones J, Foord SM, Barnes MR ( 2009 ) . Drug discovery in the extracellular matrix . INTERNATIONAL JOURNAL OF EXPERIMENTAL PATHOLOGY vol. 90 , ( 1 ) A80 - A81 .
Huxley-Jones J, Foord SM, Barnes MR ( 2008 ) . Drug discovery in the extracellular matrix . Drug Discov Today vol. 13 , ( 15-16 ) 685 - 694 .
Bansal AT, Barnes MR ( 2008 ) . Genomics in drug discovery: The best things come to those who wait . CURRENT OPINION IN DRUG DISCOVERY & DEVELOPMENT vol. 11 , ( 3 ) 303 - 310 .
Pettersson F, Morris AP, Barnes MR, Cardon LR ( 2008 ) . Goldsurfer2 (Gs2): A comprehensive tool for the analysis and visualization of genome wide association studies . BMC BIOINFORMATICS vol. 9 , Article ARTN 138 ,
Li H, Wetten S, Li L, St Jean PL, Upmanyu R, Surh L, Hosford D, Barnes MR et al. ( 2008 ) . Candidate single-nucleotide polymorphisms from a genomewide association study of Alzheimer disease . Arch Neurol vol. 65 , ( 1 ) 45 - 53 .
Zhu G, Carlsen K, Carlsen K-H, Lenney W, Silverman M, Whyte MK, Hosking L, Helms P et al. ( 2008 ) . Polymorphisms in the endothelin-1 (EDN1) are associated with asthma in two populations . GENES AND IMMUNITY vol. 9 , ( 1 ) 23 - 29 .
Chondrogiannis S, Barnes M, Osborne M, Yao L ( 2007 ) . Point of Connection Voltage Regulation Strategies for AC Connected Large Offshore Wind Farms . Wind Engineering vol. 31 , ( 6 ) 453 - 473 .
Barnes MR, Deharo S, Grocock RJ, Brown JR, Sanseau P ( 2007 ) . The micro RNA target paradigm: a fundamental and polymorphic control layer of cellular expression . EXPERT OPINION ON BIOLOGICAL THERAPY vol. 7 , ( 9 ) 1387 - 1399 .
Pettersson F, Morris AP, Derwent PS, Barnes MR, Cardon LR ( 2007 ) . GOLDsurfer2: A comprehensive tool for the analysis and visualization of whole genome association studies . GENETIC EPIDEMIOLOGY . vol. 31 , 494 - 494 .
Southan C, Ulvsbäck M, Barnes MR ( 2007 ) . A Bioinformatics Perspective on Genetics in Drug Discovery and Development . 495 - 528 .
Barnes MR ( 2007 ) . Bioinformatics Challenges for the Geneticist . 1 - 16 .
Barnes MR ( 2007 ) . Bioinformatics for Geneticists: A Bioinformatics Primer for the Analysis of Genetic Data: Second Edition . Bioinformatics for Geneticists: A Bioinformatics Primer for the Analysis of Genetic Data: Second Edition1 - 554 .
Southan C, Barnes MR ( 2007 ) . Finding, Delineating and Analysing Genes . 85 - 104 .
Barnes MR ( 2007 ) . Integrating Genetics, Genomics and Epigenomics to Identify Disease Genes . 185 - 215 .
Barnes MR, Derwent PS ( 2007 ) . Needle in a Haystack? Dealing with 500 000 SNP Genome Scans . 447 - 493 .
Brown JR, Deharo S, Dancis B, Barnes MR, Sanseau P ( 2007 ) . Non-Coding RNA Bioinformatics . 343 - 368 .
Plumpton M, Barnes MR ( 2007 ) . Predictive Functional Analysis of Polymorphisms: An Overview . 247 - 280 .
Barnes MR ( 2007 ) . Preface . Bioinformatics for Geneticists: A Bioinformatics Primer for the Analysis of Genetic Data: Second Edition
Barnes MR ( 2007 ) . Bioinformatics for Geneticists . John Wiley & Sons
Teh MT, Blaydon D, Ghali LR, Briggs V, Edmunds S, Pantazi E, Barnes MR, Leigh IM et al. ( 2007 ) . Erratum: Role for WNT16B in human epidermal keratinocyte proliferation and differentiation (Journal of Cell Science vol. 120 (330-339)) . Journal of Cell Science vol. 120 , ( 5 )
Teh MT, Blaydon D, Ghali LR, Edmunds S, Pantazi E, Barnes MR, Leigh IM, Kelsell DP et al. ( 2007 ) . Role for WNT16B in human epidermal keratinocyte proliferation and differentiation . J CELL SCI vol. 120 , ( 2 ) 330 - 339 .
Barnes MR ( 2007 ) . Gaining insight into human population- specific selection pressure . Comparative Genomics: Basic and Applied Research ,
Philpott MP, Kelsell DP, Leigh IM, TEH M, Briggs V, Pantazi E, Edmunds S, Blaydon D et al. ( 2007 ) . Role for WNT16B in Human Epidermal Keratinocyte Proliferation and Differentiation . Journal Cell Science vol. 120 , ( 2 ) 330 - 339 .
Barnes MR, Holbrook J, Feild JA, Searls DB, Sanseau P ( 2006 ) . Risk in drug trials . LANCET vol. 368 , ( 9554 ) 2205 - 2205 .
Barnes MR ( 2006 ) . Navigating the HapMap . Brief Bioinform vol. 7 , ( 3 ) 211 - 224 .
Common JEA, Bitner-Glindzicz M, O'Toole EA, Barnes MR, Jenkins L, Forge A, Kelsell DP ( 2005 ) . Specific loss of connexin 26 expression in ductal sweat gland epithelium associated with the deletion mutation del(GJB6-D13S1830) . CLIN EXP DERMATOL vol. 30 , ( 6 ) 688 - 693 .
Prabhakar U, Conway TM, Murdock P, Mooney JL, Clark S, Hedge P, Bond BC, Jazwinska EC et al. ( 2005 ) . Correlation of protein and gene expression profiles of inflammatory proteins after endotoxin challenge in human subjects . DNA AND CELL BIOLOGY vol. 24 , ( 7 ) 410 - 431 .
Scott BB, Zaratin PF, Clarke GD, Barnes MR, Murdock PR, Lynch FJ, Duckworth M ( 2004 ) . C20orf9-003 (ACI-1), a gene localized on chromosome 20q13.12 encoding for a 49 kD cytoplasmic protein with a putative nucleotide binding site . DNA SEQUENCE vol. 15 , ( 1 ) 1 - 8 .
Dow D, Devitt PJ, Candlin A, Gray IC, Barnes MR ( 2002 ) . SNP Locator - A bioinformatics tool for determining the distance between SNPs as an aid to linkage disequilibrium mapping . JOURNAL OF MEDICAL GENETICS . vol. 39 , S73 - S73 .
Barnes MR ( 2002 ) . Psychiatric genetics in silico: databases and tools for psychiatric geneticists . PSYCHIATRIC GENETICS vol. 12 , ( 2 ) 67 - 73 .
Barnes MR ( 2002 ) . SNP and mutation data on the Web - hidden treasures for uncovering . COMPARATIVE AND FUNCTIONAL GENOMICS vol. 3 , ( 1 ) 67 - 74 .
Hosking LK, Boyd PR, Xu CF, Nissum M, Cantone K, Purvis IJ, Khakhar R, Barnes MR et al. ( 2002 ) . Linkage disequilibrium mapping identifies a 390 kb region associated with CYP2D6 poor drug metabolising activity . Pharmacogenomics J vol. 2 , ( 3 ) 165 - 175 .
McGinnis RE, Fox H, Yates P, Cameron LA, Barnes MR, Gray IC, Spurr NK, Hurko O et al. ( 2001 ) . Failure to confirm NOTCH4 association with schizophrenia in a large population-based sample from Scotland . NATURE GENETICS vol. 28 , ( 2 ) 128 - 129 .
Fear MW, Kelsell DP, Spurr NK, Barnes MR ( 2000 ) . Wnt-16a, a novel Wnt-16 isoform, which shows differential expression in adult human tissues . BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS vol. 278 , ( 3 ) 814 - 820 .
James IE, Kumar S, Barnes MR, Gress CJ, Hand AT, Dodds RA, Connor JR, Bradley BR et al. ( 2000 ) . FrzB-2: a human secreted frizzled-related protein with a potential role in chondrocyte apoptosis . OSTEOARTHRITIS AND CARTILAGE vol. 8 , ( 6 ) 452 - 463 .
Sims MA, Field SD, Barnes MR, Shaikh N, Ellington K, Murphy KE, Spurr N, Campbell DA ( 2000 ) . Cloning and characterisation of ITGAV, the genomic sequence for human cell adhesion protein (vitronectin) receptor alpha subunit, CD51 . CYTOGENETICS AND CELL GENETICS vol. 89 , ( 3-4 ) 268 - 271 .
Wilgoss A, Leigh IM, Barnes MR, Dopping-Hepenstal P, Eady RA, Walter JM, Kennedy CT, Kelsell DP ( 1999 ) . Identification of a novel mutation R42P in the gap junction protein beta-3 associated with autosomal dominant erythrokeratoderma variabilis . J Invest Dermatol vol. 113 , ( 6 ) 1119 - 1122 .
Barnes MR, Russell RB ( 1999 ) . A lipid-binding domain in Wnt: a case of mistaken identity? . CURRENT BIOLOGY vol. 9 , ( 19 ) R717 - R718 .
Barnes MR, Li Z ( 1999 ) . Get practical! Bioinformatics: A Practical Guide to the Analysis of Genes and Proteins edited by Andreas D. Baxevanis and B. F. Francis Ouellette . Trends in Biotechnology vol. 17 , ( 10 )
Valdes AM, Bouzyk M, O'Brien E, Gale D, Panchal S, Barnes M, Ralston S, Reid D et al. ( 1999 ) . Role of polymorphisms in parathyroid hormone receptor 1, transforming growth factor beta 1 and estrogen receptor in the genetics of osteoporosis . AMERICAN JOURNAL OF HUMAN GENETICS vol. 65 , ( 4 ) A470 - A470 .
Valdes AM, Chamberlain JC, Bouzyk M, Panchal S, Gale D, Barnes M, Ralston SH, Reid DM et al. ( 1999 ) . Genetics of osteoporosis: Association between ESR (11q12) and ERR1 (6q25) and bone mineral density and rate of change . JOURNAL OF BONE AND MINERAL RESEARCH vol. 14 , S333 - S333 .
Barnes MR, Duckworth DM, Beeley LJ ( 1998 ) . Frizzled proteins constitute a novel family of G protein-coupled receptors, most closely related to the secretin family . TRENDS IN PHARMACOLOGICAL SCIENCES vol. 19 , ( 10 ) 399 - 400 .
Hu E, Zhu Y, Fredrickson T, Barnes M, Kelsell D, Beeley L, Brooks D ( 1998 ) . Erratum: Tissue restricted expression of two human Frzbs in preadipocytes and pancreas (Biochemical and Biophysical Research Communications (1998) 247, 2 (287-293)) . Biochemical and Biophysical Research Communications vol. 248 , ( 3 ) 940 - 942 .
Hu ED, Zhu Y, Fredrickson T, Barnes M, Kelsell D, Beeley L, Brooks D ( 1998 ) . Tissue restricted expression of two human Frzbs in preadipocytes and pancreas . BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS vol. 247 , ( 2 ) 287 - 293 .
Duetz WA, Wind B, van Andel JG, Barnes MR, Williams PA, Rutgers M ( 1998 ) . Biodegradation kinetics of toluene, m-xylene, p-xylene and their intermediates through the upper TOL pathway in Pseudomonas putida (pWW0) . MICROBIOLOGY-SGM vol. 144 , 1669 - 1675 .
Barnes MR, Duetz WA, Williams PA ( 1997 ) . A 3-(3-hydroxyphenyl)propionic acid catabolic pathway in Rhodococcus globerulus PWD1: Cloning and characterization of the hpp operon . JOURNAL OF BACTERIOLOGY vol. 179 , ( 19 ) 6145 - 6153 .